Nucleotide
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DnaSP (DNA Sequence Polymorphism) v.5.10.01
Nucleotide polymorphism analysis made easy. DnaSP (DNA Sequence Polymorphism), is a utility package for the analysis of nucleotide polymorphism from aligned DNA sequence data.
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DAMBE (Data Analysis and Molecular Biology and Evolution) v.5.2.30
DAMBE (Data Analysis and Molecular Biology and Evolution) help you with data analysis and molecular biology and evolution.Here is a short summary of DAMBE functions 1. Sequence alignment * General sequence alignment with nucleotide and amino acid
Matrix Editor v.2.1.1
Matrix Editor is a windows application, that designated to simplify the processes of creation and editing TRANSFAC(R)(BIOBASE product) nucleotide weight matrices (transcription factor weight matrices), and appropriate matrix sets profiles.NOTE: 1.
FastTree v.2.1.3
Phylogenetic trees analysis made easy. FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences.
FASTA BLAST Scan v.2.1
FASTA BLAST Scan is a software for processing nucleotide sequences alignment made with FASTA and BLAST alignment tools. Nucleotide sequences alignment analysis made easy.FASTA BLAST Scan's features Input 1. FASTA BLAST Scan can process two types of
Seq-Gen v.1.3.2
Seq-Gen is a software that will simulate the evolution of nucleotide or amino acid sequences along a phylogeny, using common models of the substitution process.
SinicView v.1.03
View nucleotide sequence alignment with this application. SinicView (for Sequence-aligning INnovative and Interactive Comparison VIEWer) is a visualization environment for comparisons of multiple nucleotide sequence alignment tools,
GS2 v.1.8
Analyze genome association studies with this tool. GS2 help you analyze and visualize whole genome association studies. With recent advances in the efficiency of high-throughput single nucleotide polymorphism (SNP) genotyping technology,
FreqAnalysis v.1.0
freqAnalysis is a software for the statistical analysis of nucleotide motifs, it was designed to identify statistically aberrant k-length nucleotide motifs in coding DNA sequences,
Leaphy v.1.0 Beta
Likelihood estimation algorithms in phylogenetics. Leaphy uses maximum likelihood (ML) to estimate trees from aligned amino acid and nucleotide sequences under a variety of commonly used and popular models.The 1.
ASaturA v.1.0
Demonstrate saturation in nucleotide sequences. The usual way to demonstrate saturation in nucleotide sequences is to plot the fraction of differences between sequences against the evolutionary distance separating them.